Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs473456 chr17:30286460 G/C 2.52E-12 283 26.6 24.3 10.37 KM Plot
KIRP rs4741264 chr9:12960088 A/G 1.64E-6 289 25.97 25.6 6.53 KM Plot
KIRP rs474455 chr17:30312465 A/T 8.57E-12 287 26.57 23.85 10.37 KM Plot
KIRP rs4783648 chr16:68558334 C/T 5.23E-5 276 25.5 25.93 16.08 KM Plot
KIRP rs4784216 chr16:51406327 A/G 7.72E-5 286 26.1 22.57 9 KM Plot
KIRP rs4785702 chr16:89733206 G/A 3.2E-8 282 26.37 25.6 9.77 KM Plot
KIRP rs4785931 chr16:3410145 C/T 1.15E-5 284 10.83 25.63 26 KM Plot
KIRP rs479200 chr1:231543780 G/A 0.000196 284 19.9 30.23 25.23 KM Plot
KIRP rs4799377 chr18:32844749 T/G 6.03E-5 288 10.7 29.5 25.53 KM Plot
KIRP rs4801481 chr19:57949426 A/G 1.11E-6 289 10.83 23.77 26.1 KM Plot
KIRP rs4801905 chr19:39312085 T/C 9.24E-6 276 24.48 38.03 10.97 KM Plot
KIRP rs4808176 chr19:19133414 A/G 6.01E-5 289 25.78 28.17 25.37 KM Plot
KIRP rs4808895 chr19:19100676 C/G 4.16E-5 288 25.78 25.7 25.5 KM Plot
KIRP rs4822081 chr22:42406788 C/T 0.000147 288 25.53 26.37 21.93 KM Plot
KIRP rs4851293 chr2:100925106 A/T 9.23E-5 284 27.43 25.7 25.15 KM Plot