Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs473456 | chr17:30286460 | G/C | 2.52E-12 | 283 | 26.6 | 24.3 | 10.37 | KM Plot |
KIRP | rs4741264 | chr9:12960088 | A/G | 1.64E-6 | 289 | 25.97 | 25.6 | 6.53 | KM Plot |
KIRP | rs474455 | chr17:30312465 | A/T | 8.57E-12 | 287 | 26.57 | 23.85 | 10.37 | KM Plot |
KIRP | rs4783648 | chr16:68558334 | C/T | 5.23E-5 | 276 | 25.5 | 25.93 | 16.08 | KM Plot |
KIRP | rs4784216 | chr16:51406327 | A/G | 7.72E-5 | 286 | 26.1 | 22.57 | 9 | KM Plot |
KIRP | rs4785702 | chr16:89733206 | G/A | 3.2E-8 | 282 | 26.37 | 25.6 | 9.77 | KM Plot |
KIRP | rs4785931 | chr16:3410145 | C/T | 1.15E-5 | 284 | 10.83 | 25.63 | 26 | KM Plot |
KIRP | rs479200 | chr1:231543780 | G/A | 0.000196 | 284 | 19.9 | 30.23 | 25.23 | KM Plot |
KIRP | rs4799377 | chr18:32844749 | T/G | 6.03E-5 | 288 | 10.7 | 29.5 | 25.53 | KM Plot |
KIRP | rs4801481 | chr19:57949426 | A/G | 1.11E-6 | 289 | 10.83 | 23.77 | 26.1 | KM Plot |
KIRP | rs4801905 | chr19:39312085 | T/C | 9.24E-6 | 276 | 24.48 | 38.03 | 10.97 | KM Plot |
KIRP | rs4808176 | chr19:19133414 | A/G | 6.01E-5 | 289 | 25.78 | 28.17 | 25.37 | KM Plot |
KIRP | rs4808895 | chr19:19100676 | C/G | 4.16E-5 | 288 | 25.78 | 25.7 | 25.5 | KM Plot |
KIRP | rs4822081 | chr22:42406788 | C/T | 0.000147 | 288 | 25.53 | 26.37 | 21.93 | KM Plot |
KIRP | rs4851293 | chr2:100925106 | A/T | 9.23E-5 | 284 | 27.43 | 25.7 | 25.15 | KM Plot |